VAT on intra-EU shipments

Via our webstore, we take orders from and ship goods to customers outside the UK but within the EU. Does anyone have any advice on how to handle VAT on these orders, and, in particular, on how to capture intrastat data correctly (when processing the orders through RMS)? We use Quickbooks and need a way of capturing separately sales and VAT data for intra-EU transactions so that we can enter sales data into Quickbooks using the correct VAT code. I cannot think of any way of achieving this other than by having a separate cashier set up in RMS to capture these transactions, but this would be clumsy and prone to error.

Any ideas, please?

Thanks.

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Micky S
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